Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM66Tripartite motif containing 66. (1204 aa)    
Predicted Functional Partners:
CBX3
Uncharacterized protein.
    
 0.953
TRIM8
Tripartite motif containing 8.
      
 0.846
CBX1
Chromobox 1.
    
 0.814
CBX5
Chromobox 5.
    
 0.804
PHIP
Pleckstrin homology domain interacting protein.
    
 
 0.728
TRIM44
Tripartite motif containing 44.
    
 
 0.695
TRIM62
Tripartite motif containing 62.
      
 0.690
TRIM11
Tripartite motif containing 11.
      
 0.687
TRIM27
Tripartite motif containing 27.
      
 0.682
TRIM4
Tripartite motif containing 4.
      
 0.680
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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