STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE3DUbiquitin protein ligase E3D. (337 aa)    
Predicted Functional Partners:
CPSF3
Cleavage and polyadenylation specific factor 3.
    
 
 0.924
RBBP6
Uncharacterized protein.
    
 0.858
G1PYZ7_MYOLU
Uncharacterized protein.
    
 0.858
G1PZ66_MYOLU
Uncharacterized protein.
    
 0.858
G1PZW3_MYOLU
DWNN domain-containing protein.
    
 0.858
G1Q1I4_MYOLU
Uncharacterized protein.
    
 0.858
G1Q4I1_MYOLU
Uncharacterized protein.
    
 0.858
G1Q8C1_MYOLU
CCHC-type domain-containing protein.
    
 0.858
G1QDE2_MYOLU
DWNN domain-containing protein.
    
 0.858
G1QF66_MYOLU
DWNN domain-containing protein.
    
 0.858
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.