STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARFGEF3ARFGEF family member 3. (2135 aa)    
Predicted Functional Partners:
PHB2
Prohibitin.
    
 
 0.875
CCDC167
Coiled-coil domain containing 167.
      
 0.769
LRRTM4
Leucine rich repeat transmembrane neuronal 4.
      
 0.769
CHMP7
Charged multivesicular body protein 7.
      
 0.749
PHACTR2
Phosphatase and actin regulator.
      
 0.688
SERPINI2
Serpin family I member 2; Belongs to the serpin family.
      
 0.686
PKIA
cAMP-dependent protein kinase inhibitor; Belongs to the PKI family.
      
 0.683
PITPNC1
Phosphatidylinositol transfer protein cytoplasmic 1.
   
  
 0.659
RASGEF1B
RasGEF domain family member 1B.
   
  
 0.636
KIF16B
Kinesin family member 16B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.616
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.