STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPHN1Oligophrenin 1. (670 aa)    
Predicted Functional Partners:
CDC42
Cell division cycle 42.
    
 0.808
GINM1
Glycoprotein integral membrane 1.
      
 0.688
ZC4H2
Zinc finger C4H2-type containing.
      
 0.686
PAQR5
Progestin and adipoQ receptor family member 5.
   
  
 0.684
MYO9A
Myosin IXA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
0.668
PJA1
Praja ring finger ubiquitin ligase 1.
      
 0.665
RAC1
Rac family small GTPase 1.
    
 0.661
ARHGAP4
Rho GTPase activating protein 4.
    
 
0.655
RHOA
Uncharacterized protein.
    
 0.654
RHOC
Uncharacterized protein.
    
 0.654
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.