STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF25Ring finger protein 25. (458 aa)    
Predicted Functional Partners:
UBE2D4
Ubiquitin conjugating enzyme E2 D4 (putative); Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.908
UBE2D1
Ubiquitin conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.789
PSMA6
Proteasome subunit alpha type.
      
 0.751
UBE2T
Ubiquitin conjugating enzyme E2 T; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.749
ZNF408
Zinc finger protein 408.
   
    0.744
MINK1
Misshapen like kinase 1.
      
 0.701
PSME1
Proteasome activator subunit 1.
      
 0.692
PSMB4
Proteasome subunit beta; Belongs to the peptidase T1B family.
      
 0.682
UBE2O
Ubiquitin conjugating enzyme E2 O.
    
 
 0.682
SNAPIN
SNAP associated protein.
      
 0.674
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.