GCNT1 protein (Myotis lucifugus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

GCNT1

Glucosaminyl (N-acetyl) transferase 1. (428 aa)

Predicted Functional Partners:

C1GALT1

0.962

B4GALT5

0.956

ST3GAL1

0.953

C1GALT1C1

0.944

GALNT12

0.942

GALNT8

0.941

ST3GAL2

0.939

B3GNT3

0.939

GALNT5

0.938

GALNT3

0.938

Your Current Organism:

Myotis lucifugus

NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B3GNT3	B4GALT5	ENSMLUP00000018223	ENSMLUP00000011917	Hexosyltransferase.	Beta-1,4-galactosyltransferase 5.	0.487
B3GNT3	C1GALT1	ENSMLUP00000018223	ENSMLUP00000013457	Hexosyltransferase.	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.	0.969
B3GNT3	C1GALT1C1	ENSMLUP00000018223	ENSMLUP00000016666	Hexosyltransferase.	C1GALT1 specific chaperone 1.	0.962
B3GNT3	GALNT3	ENSMLUP00000018223	ENSMLUP00000004353	Hexosyltransferase.	Polypeptide N-acetylgalactosaminyltransferase.	0.421
B3GNT3	GALNT5	ENSMLUP00000018223	ENSMLUP00000003225	Hexosyltransferase.	Polypeptide N-acetylgalactosaminyltransferase.	0.570
B3GNT3	GCNT1	ENSMLUP00000018223	ENSMLUP00000001400	Hexosyltransferase.	Glucosaminyl (N-acetyl) transferase 1.	0.939
B3GNT3	ST3GAL1	ENSMLUP00000018223	ENSMLUP00000015070	Hexosyltransferase.	ST3 beta-galactoside alpha-2,3-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.	0.955
B3GNT3	ST3GAL2	ENSMLUP00000018223	ENSMLUP00000000110	Hexosyltransferase.	ST3 beta-galactoside alpha-2,3-sialyltransferase 2; Belongs to the glycosyltransferase 29 family.	0.935
B4GALT5	B3GNT3	ENSMLUP00000011917	ENSMLUP00000018223	Beta-1,4-galactosyltransferase 5.	Hexosyltransferase.	0.487
B4GALT5	C1GALT1	ENSMLUP00000011917	ENSMLUP00000013457	Beta-1,4-galactosyltransferase 5.	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.	0.692
B4GALT5	GALNT3	ENSMLUP00000011917	ENSMLUP00000004353	Beta-1,4-galactosyltransferase 5.	Polypeptide N-acetylgalactosaminyltransferase.	0.600
B4GALT5	GCNT1	ENSMLUP00000011917	ENSMLUP00000001400	Beta-1,4-galactosyltransferase 5.	Glucosaminyl (N-acetyl) transferase 1.	0.956
B4GALT5	ST3GAL1	ENSMLUP00000011917	ENSMLUP00000015070	Beta-1,4-galactosyltransferase 5.	ST3 beta-galactoside alpha-2,3-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.	0.537
B4GALT5	ST3GAL2	ENSMLUP00000011917	ENSMLUP00000000110	Beta-1,4-galactosyltransferase 5.	ST3 beta-galactoside alpha-2,3-sialyltransferase 2; Belongs to the glycosyltransferase 29 family.	0.581
C1GALT1	B3GNT3	ENSMLUP00000013457	ENSMLUP00000018223	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.	Hexosyltransferase.	0.969
C1GALT1	B4GALT5	ENSMLUP00000013457	ENSMLUP00000011917	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.	Beta-1,4-galactosyltransferase 5.	0.692
C1GALT1	C1GALT1C1	ENSMLUP00000013457	ENSMLUP00000016666	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.	C1GALT1 specific chaperone 1.	0.999
C1GALT1	GALNT12	ENSMLUP00000013457	ENSMLUP00000002390	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.	Polypeptide N-acetylgalactosaminyltransferase.	0.804
C1GALT1	GALNT3	ENSMLUP00000013457	ENSMLUP00000004353	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.	Polypeptide N-acetylgalactosaminyltransferase.	0.771
C1GALT1	GALNT5	ENSMLUP00000013457	ENSMLUP00000003225	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.	Polypeptide N-acetylgalactosaminyltransferase.	0.850