Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SRSF12Serine and arginine rich splicing factor 12. (247 aa)    
Predicted Functional Partners:
TRA2A
Transformer 2 alpha homolog.
   
 0.965
SRSF1
Uncharacterized protein.
   
 0.959
TRA2B
Transformer 2 beta homolog.
   
 0.922
CLK2
CDC like kinase 2; Belongs to the protein kinase superfamily.
   
 
 0.906
G1P4E6_MYOLU
RRM domain-containing protein.
   
 0.899
SRSF10
RRM domain-containing protein.
   
 0.899
SRSF5
Serine and arginine rich splicing factor 5.
   
 0.847
SRSF11
RRM domain-containing protein.
   
 0.833
SREK1
Splicing regulatory glutamic acid and lysine rich protein 1.
   
 0.833
G1Q5B8_MYOLU
RRM domain-containing protein.
   
 0.833
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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