Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UBE2L3Ubiquitin conjugating enzyme E2 L3; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)    
Predicted Functional Partners:
PRKN
Parkin RBR E3 ubiquitin protein ligase.
    
  0.913
LOC102423376
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
  
 
0.908
G1QBI4_MYOLU
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
  
 
0.907
TSTA3
Tissue specific transplantation antigen P35B.
 
    
 0.712
NME8
NME/NM23 family member 8.
   
 
 0.709
LOC102420450
Ubiquitin-like domain-containing protein.
    
  0.686
G1Q2S7_MYOLU
Ubiquitin-like domain-containing protein.
    
  0.686
LOC102442670
Uncharacterized protein.
   
 0.680
ENSMLUP00000021652
annotation not available
   
 0.680
WDR90
WD repeat domain 90.
    
 
 0.674
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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