Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SATB2DNA-binding protein SATB. (744 aa)    
Predicted Functional Partners:
TBR1
T-box brain transcription factor 1.
   
 
 0.923
UBE2I
Ubiquitin conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.890
FEZF2
FEZ family zinc finger 2.
    
 
 0.864
CASP6
Caspase 6; Belongs to the peptidase C14A family.
    
 0.856
PIAS1
Protein inhibitor of activated STAT 1.
    
 0.843
PIAS4
Protein inhibitor of activated STAT 4.
    
  0.817
CASP3
Caspase 3; Belongs to the peptidase C14A family.
    
 0.814
PAX6
Paired box 6.
      
 0.814
CUX2
Homeobox protein cut-like.
    
 
 0.802
LOC102441213
SP-RING-type domain-containing protein.
    
 0.788
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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