MFSD1 protein (Myotis lucifugus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

MFSD1

Major facilitator superfamily domain containing 1. (465 aa)

Predicted Functional Partners:

MFSD8

0.740

TOMM70

0.736

SLC29A3

0.704

GFM1

0.691

MLF1

0.682

CDS2

0.670

CDS1

0.670

NUDT9

0.631

SLC39A11

0.618

TYMS

0.592

Your Current Organism:

Myotis lucifugus

NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDS1	CDS2	ENSMLUP00000010575	ENSMLUP00000001559	Phosphatidate cytidylyltransferase; Provides CDP-diacylglycerol, an important precursor for the synthesis of phosphatidylinositol, phosphatidylglycerol, and cardiolipin.	Phosphatidate cytidylyltransferase; Provides CDP-diacylglycerol, an important precursor for the synthesis of phosphatidylinositol, phosphatidylglycerol, and cardiolipin.	0.901
CDS1	MFSD1	ENSMLUP00000010575	ENSMLUP00000001448	Phosphatidate cytidylyltransferase; Provides CDP-diacylglycerol, an important precursor for the synthesis of phosphatidylinositol, phosphatidylglycerol, and cardiolipin.	Major facilitator superfamily domain containing 1.	0.670
CDS2	CDS1	ENSMLUP00000001559	ENSMLUP00000010575	Phosphatidate cytidylyltransferase; Provides CDP-diacylglycerol, an important precursor for the synthesis of phosphatidylinositol, phosphatidylglycerol, and cardiolipin.	Phosphatidate cytidylyltransferase; Provides CDP-diacylglycerol, an important precursor for the synthesis of phosphatidylinositol, phosphatidylglycerol, and cardiolipin.	0.901
CDS2	MFSD1	ENSMLUP00000001559	ENSMLUP00000001448	Phosphatidate cytidylyltransferase; Provides CDP-diacylglycerol, an important precursor for the synthesis of phosphatidylinositol, phosphatidylglycerol, and cardiolipin.	Major facilitator superfamily domain containing 1.	0.670
GFM1	MFSD1	ENSMLUP00000000409	ENSMLUP00000001448	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Does not mediate the disassembly of ribosomes from messenger RNA at the termination of mito [...]	Major facilitator superfamily domain containing 1.	0.691
GFM1	MLF1	ENSMLUP00000000409	ENSMLUP00000000404	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Does not mediate the disassembly of ribosomes from messenger RNA at the termination of mito [...]	Myeloid leukemia factor 1.	0.681
GFM1	NUDT9	ENSMLUP00000000409	ENSMLUP00000006963	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Does not mediate the disassembly of ribosomes from messenger RNA at the termination of mito [...]	Nudix hydrolase 9.	0.511
MFSD1	CDS1	ENSMLUP00000001448	ENSMLUP00000010575	Major facilitator superfamily domain containing 1.	Phosphatidate cytidylyltransferase; Provides CDP-diacylglycerol, an important precursor for the synthesis of phosphatidylinositol, phosphatidylglycerol, and cardiolipin.	0.670
MFSD1	CDS2	ENSMLUP00000001448	ENSMLUP00000001559	Major facilitator superfamily domain containing 1.	Phosphatidate cytidylyltransferase; Provides CDP-diacylglycerol, an important precursor for the synthesis of phosphatidylinositol, phosphatidylglycerol, and cardiolipin.	0.670
MFSD1	GFM1	ENSMLUP00000001448	ENSMLUP00000000409	Major facilitator superfamily domain containing 1.	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Does not mediate the disassembly of ribosomes from messenger RNA at the termination of mito [...]	0.691
MFSD1	MFSD8	ENSMLUP00000001448	ENSMLUP00000004926	Major facilitator superfamily domain containing 1.	Major facilitator superfamily domain containing 8.	0.740
MFSD1	MLF1	ENSMLUP00000001448	ENSMLUP00000000404	Major facilitator superfamily domain containing 1.	Myeloid leukemia factor 1.	0.682
MFSD1	NUDT9	ENSMLUP00000001448	ENSMLUP00000006963	Major facilitator superfamily domain containing 1.	Nudix hydrolase 9.	0.631
MFSD1	SLC29A3	ENSMLUP00000001448	ENSMLUP00000019897	Major facilitator superfamily domain containing 1.	Solute carrier family 29 member 3.	0.704
MFSD1	SLC39A11	ENSMLUP00000001448	ENSMLUP00000015180	Major facilitator superfamily domain containing 1.	Solute carrier family 39 member 11.	0.618
MFSD1	TOMM70	ENSMLUP00000001448	ENSMLUP00000003957	Major facilitator superfamily domain containing 1.	Translocase of outer mitochondrial membrane 70.	0.736
MFSD1	TYMS	ENSMLUP00000001448	ENSMLUP00000008731	Major facilitator superfamily domain containing 1.	Thymidylate synthetase.	0.592
MFSD8	MFSD1	ENSMLUP00000004926	ENSMLUP00000001448	Major facilitator superfamily domain containing 8.	Major facilitator superfamily domain containing 1.	0.740
MFSD8	SLC29A3	ENSMLUP00000004926	ENSMLUP00000019897	Major facilitator superfamily domain containing 8.	Solute carrier family 29 member 3.	0.466
MLF1	GFM1	ENSMLUP00000000404	ENSMLUP00000000409	Myeloid leukemia factor 1.	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Does not mediate the disassembly of ribosomes from messenger RNA at the termination of mito [...]	0.681