SORCS1 protein (Myotis lucifugus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Myotis lucifugus

NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APLP1	NGFR	ENSMLUP00000012419	ENSMLUP00000017790	Amyloid beta precursor like protein 1.	Nerve growth factor receptor.	0.785
APLP1	SORCS1	ENSMLUP00000012419	ENSMLUP00000001476	Amyloid beta precursor like protein 1.	Sortilin related VPS10 domain containing receptor 1.	0.811
APLP1	SORT1	ENSMLUP00000012419	ENSMLUP00000007732	Amyloid beta precursor like protein 1.	Sortilin.	0.586
CLTC	GGA1	ENSMLUP00000003326	ENSMLUP00000010347	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Golgi associated, gamma adaptin ear containing, ARF binding protein 1.	0.939
CLTC	GGA2	ENSMLUP00000003326	ENSMLUP00000011035	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Golgi associated, gamma adaptin ear containing, ARF binding protein 2.	0.948
CLTC	SNX5	ENSMLUP00000003326	ENSMLUP00000002502	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Sorting nexin; Involved in several stages of intracellular trafficking.	0.807
CLTC	SORCS1	ENSMLUP00000003326	ENSMLUP00000001476	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Sortilin related VPS10 domain containing receptor 1.	0.766
CLTC	SORT1	ENSMLUP00000003326	ENSMLUP00000007732	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Sortilin.	0.789
CLTC	VPS35	ENSMLUP00000003326	ENSMLUP00000012965	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.632
GGA1	CLTC	ENSMLUP00000010347	ENSMLUP00000003326	Golgi associated, gamma adaptin ear containing, ARF binding protein 1.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.939
GGA1	GGA2	ENSMLUP00000010347	ENSMLUP00000011035	Golgi associated, gamma adaptin ear containing, ARF binding protein 1.	Golgi associated, gamma adaptin ear containing, ARF binding protein 2.	0.964
GGA1	SORCS1	ENSMLUP00000010347	ENSMLUP00000001476	Golgi associated, gamma adaptin ear containing, ARF binding protein 1.	Sortilin related VPS10 domain containing receptor 1.	0.736
GGA1	SORT1	ENSMLUP00000010347	ENSMLUP00000007732	Golgi associated, gamma adaptin ear containing, ARF binding protein 1.	Sortilin.	0.985
GGA1	VPS35	ENSMLUP00000010347	ENSMLUP00000012965	Golgi associated, gamma adaptin ear containing, ARF binding protein 1.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.517
GGA2	CLTC	ENSMLUP00000011035	ENSMLUP00000003326	Golgi associated, gamma adaptin ear containing, ARF binding protein 2.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.948
GGA2	GGA1	ENSMLUP00000011035	ENSMLUP00000010347	Golgi associated, gamma adaptin ear containing, ARF binding protein 2.	Golgi associated, gamma adaptin ear containing, ARF binding protein 1.	0.964
GGA2	SORCS1	ENSMLUP00000011035	ENSMLUP00000001476	Golgi associated, gamma adaptin ear containing, ARF binding protein 2.	Sortilin related VPS10 domain containing receptor 1.	0.736
GGA2	SORT1	ENSMLUP00000011035	ENSMLUP00000007732	Golgi associated, gamma adaptin ear containing, ARF binding protein 2.	Sortilin.	0.970
GGA2	VPS35	ENSMLUP00000011035	ENSMLUP00000012965	Golgi associated, gamma adaptin ear containing, ARF binding protein 2.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.422
NGFR	APLP1	ENSMLUP00000017790	ENSMLUP00000012419	Nerve growth factor receptor.	Amyloid beta precursor like protein 1.	0.785