STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SORCS1Sortilin related VPS10 domain containing receptor 1. (957 aa)    
Predicted Functional Partners:
LOC102442976
Uncharacterized protein.
     
 0.955
SORT1
Sortilin.
    
0.887
APP
Amyloid beta precursor protein.
    
 0.835
VPS35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.804
NGFR
Nerve growth factor receptor.
    
 0.794
ZFP69
ZFP69 zinc finger protein.
    
 
 0.791
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
    
 
 0.746
CLTC
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.729
PSMA1
Proteasome subunit alpha type.
    
 
 0.725
PSMB1
Proteasome subunit beta.
    
 
 0.725
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.