HOMER2 protein (Myotis lucifugus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

HOMER2

Homer scaffold protein 2. (278 aa)

Predicted Functional Partners:

HOMER1

0.999

HOMER3

0.998

GRM1

0.978

DBN1

0.958

IFT57

0.939

PALLD

0.925

RNF41

0.889

G1Q8D6_MYOLU

0.889

MYPN

0.869

G1PFG4_MYOLU

0.859

Your Current Organism:

Myotis lucifugus

NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DBN1	HOMER1	ENSMLUP00000003899	ENSMLUP00000009991	Drebrin 1.	Homer scaffold protein 1.	0.925
DBN1	HOMER2	ENSMLUP00000003899	ENSMLUP00000001477	Drebrin 1.	Homer scaffold protein 2.	0.958
DBN1	HOMER3	ENSMLUP00000003899	ENSMLUP00000011092	Drebrin 1.	WH1 domain-containing protein.	0.932
G1PFG4_MYOLU	GRM1	ENSMLUP00000009312	ENSMLUP00000004113	Uncharacterized protein.	Glutamate metabotropic receptor 1.	0.545
G1PFG4_MYOLU	HOMER1	ENSMLUP00000009312	ENSMLUP00000009991	Uncharacterized protein.	Homer scaffold protein 1.	0.970
G1PFG4_MYOLU	HOMER2	ENSMLUP00000009312	ENSMLUP00000001477	Uncharacterized protein.	Homer scaffold protein 2.	0.859
G1PFG4_MYOLU	HOMER3	ENSMLUP00000009312	ENSMLUP00000011092	Uncharacterized protein.	WH1 domain-containing protein.	0.927
G1PFG4_MYOLU	IFT57	ENSMLUP00000009312	ENSMLUP00000020403	Uncharacterized protein.	Intraflagellar transport 57.	0.563
G1Q8D6_MYOLU	HOMER1	ENSMLUP00000019969	ENSMLUP00000009991	RING-type domain-containing protein.	Homer scaffold protein 1.	0.644
G1Q8D6_MYOLU	HOMER2	ENSMLUP00000019969	ENSMLUP00000001477	RING-type domain-containing protein.	Homer scaffold protein 2.	0.889
G1Q8D6_MYOLU	HOMER3	ENSMLUP00000019969	ENSMLUP00000011092	RING-type domain-containing protein.	WH1 domain-containing protein.	0.644
GRM1	G1PFG4_MYOLU	ENSMLUP00000004113	ENSMLUP00000009312	Glutamate metabotropic receptor 1.	Uncharacterized protein.	0.545
GRM1	HOMER1	ENSMLUP00000004113	ENSMLUP00000009991	Glutamate metabotropic receptor 1.	Homer scaffold protein 1.	0.997
GRM1	HOMER2	ENSMLUP00000004113	ENSMLUP00000001477	Glutamate metabotropic receptor 1.	Homer scaffold protein 2.	0.978
GRM1	HOMER3	ENSMLUP00000004113	ENSMLUP00000011092	Glutamate metabotropic receptor 1.	WH1 domain-containing protein.	0.993
HOMER1	DBN1	ENSMLUP00000009991	ENSMLUP00000003899	Homer scaffold protein 1.	Drebrin 1.	0.925
HOMER1	G1PFG4_MYOLU	ENSMLUP00000009991	ENSMLUP00000009312	Homer scaffold protein 1.	Uncharacterized protein.	0.970
HOMER1	G1Q8D6_MYOLU	ENSMLUP00000009991	ENSMLUP00000019969	Homer scaffold protein 1.	RING-type domain-containing protein.	0.644
HOMER1	GRM1	ENSMLUP00000009991	ENSMLUP00000004113	Homer scaffold protein 1.	Glutamate metabotropic receptor 1.	0.997
HOMER1	HOMER2	ENSMLUP00000009991	ENSMLUP00000001477	Homer scaffold protein 1.	Homer scaffold protein 2.	0.999