Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PPFIA1PTPRF interacting protein alpha 1. (1269 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.904
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 0.897
G1QG80_MYOLU
Uncharacterized protein.
   
  0.893
PTPRF
Protein tyrosine phosphatase receptor type F.
    
 0.862
PTPRS
Protein tyrosine phosphatase receptor type S.
    
 0.847
MPP1
Membrane palmitoylated protein 1; Belongs to the MAGUK family.
    
 0.844
ERC2
ELKS/RAB6-interacting/CAST family member 2.
   
 
 0.835
ERC1
ELKS/RAB6-interacting/CAST family member 1.
   
 
 0.833
G1P2N9_MYOLU
Uncharacterized protein.
   
 0.794
G1Q3S8_MYOLU
Uncharacterized protein.
   
 0.794
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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