STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDHB15Protocadherin beta 15. (795 aa)    
Predicted Functional Partners:
EMC1
ER membrane protein complex subunit 1.
      
 0.769
UBR4
Ubiquitin protein ligase E3 component n-recognin 4.
      
 0.688
SERINC2
Serine incorporator 2.
      
 0.680
NAP1L4
Nucleosome assembly protein 1 like 4; Belongs to the nucleosome assembly protein (NAP) family.
      
 0.618
CARS2
Cysteinyl-tRNA synthetase 2, mitochondrial.
      
 0.618
UCKL1
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
 0.595
JUP
Junction plakoglobin.
    
 0.595
CTNNB1
Catenin beta 1.
    
 0.595
UCK2
Uridine-cytidine kinase 2.
    
 0.595
MYO9A
Myosin IXA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.580
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.