STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SATB1DNA-binding protein SATB. (766 aa)    
Predicted Functional Partners:
UBE2I
Ubiquitin conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.890
CASP6
Caspase 6; Belongs to the peptidase C14A family.
    
 0.886
PIAS1
Protein inhibitor of activated STAT 1.
    
 0.843
PIAS4
Protein inhibitor of activated STAT 4.
    
  0.817
LOC102441213
SP-RING-type domain-containing protein.
    
 0.788
LOC102437090
Uncharacterized protein.
    
 0.788
CASP3
Caspase 3; Belongs to the peptidase C14A family.
    
 0.758
TBR1
T-box brain transcription factor 1.
   
 
 0.737
COG2
Component of oligomeric golgi complex 2.
    
   0.727
SUMO1
Small ubiquitin-related modifier.
    
 0.720
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.