STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSBP2Single stranded DNA binding protein 2. (361 aa)    
Predicted Functional Partners:
LDB1
LIM domain binding 1.
    
 
 0.869
LDB2
LIM domain binding 2.
    
 
 0.817
RNF11
Ring finger protein 11.
   
    0.776
G1QA08_MYOLU
RING-type domain-containing protein.
   
    0.776
LHX4
LIM homeobox 4.
    
 
 0.660
LHX1
LIM homeobox 1.
    
 
 0.659
LHX2
LIM homeobox 2.
    
 
 0.620
PARP8
Poly [ADP-ribose] polymerase.
      
 0.611
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 
 0.611
SLC4A3
Anion exchange protein.
      
 0.611
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.