STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM43AFamily with sequence similarity 43 member A. (404 aa)    
Predicted Functional Partners:
SCLY
Selenocysteine lyase.
      
 0.720
FAM13A
Family with sequence similarity 13 member A.
      
 0.710
GPR12
G protein-coupled receptor 12; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.688
G1QA97_MYOLU
NTR domain-containing protein.
      
 0.641
TENT5B
Terminal nucleotidyltransferase 5B.
      
 0.617
XXYLT1
Xyloside xylosyltransferase 1.
      
 0.612
TENT5C
Terminal nucleotidyltransferase 5C.
      
 0.612
GAN
Gigaxonin.
      
 0.612
MUL1
Mitochondrial E3 ubiquitin protein ligase 1.
      
 0.606
G1Q2V8_MYOLU
RING-type domain-containing protein.
      
 0.597
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.