Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HMGXB4HMG-box containing 4. (601 aa)    
Predicted Functional Partners:
BPTF
Bromodomain PHD finger transcription factor.
    
  0.971
NCOR1
Nuclear receptor corepressor 1.
    
   0.943
SMARCA1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1.
    
 0.876
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
    
 0.871
BRD3
Bromodomain containing 3.
   
   0.863
RBBP4
RB binding protein 4, chromatin remodeling factor.
    
  0.847
RBBP7
RB binding protein 7, chromatin remodeling factor.
    
  0.847
TRIP12
Thyroid hormone receptor interactor 12.
    
 
 0.828
ZMIZ2
Zinc finger MIZ-type containing 2.
   
  
 0.737
RILPL1
Rab interacting lysosomal protein like 1.
    
   0.713
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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