STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMGXB4HMG-box containing 4. (601 aa)    
Predicted Functional Partners:
FOXRED2
FAD dependent oxidoreductase domain containing 2.
      
 0.769
RASD2
RASD family member 2.
      
 0.737
BPTF
Bromodomain PHD finger transcription factor.
    
  0.723
TRIP12
Thyroid hormone receptor interactor 12.
    
 
 0.706
SAMD5
Sterile alpha motif domain containing 5.
    
 
 0.705
PRPSAP1
Phosphoribosyl pyrophosphate synthetase associated protein 1.
      
 0.682
RBFOX2
RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.
      
 0.681
TXN2
Thioredoxin 2.
      
 0.678
METTL23
Methyltransferase like 23.
      
 0.659
SMARCA1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1.
    
 
 0.659
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.