STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
URODUroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. (367 aa)    
Predicted Functional Partners:
PPOX
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
 
 0.997
HMBS
Hydroxymethylbilane synthase.
 0.997
FECH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
 
  
 0.985
CPOX
Uncharacterized protein.
  
 0.983
G1Q7N5_MYOLU
HEM4 domain-containing protein.
  
 
 0.978
ALAD
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
 
 
 0.944
CDK5RAP1
CDK5 regulatory subunit associated protein 1.
  
 
 0.872
CDKAL1
CDK5 regulatory subunit associated protein 1 like 1.
  
 
 0.872
IYD
Iodotyrosine deiodinase.
    
 0.859
G1PN63_MYOLU
Flavodoxin-like domain-containing protein.
    
  0.858
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.