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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZFP1ZFP1 zinc finger protein. (405 aa)    
Predicted Functional Partners:
G1PBB6_MYOLU
Uncharacterized protein.
    
  0.763
G1PLR7_MYOLU
Uncharacterized protein.
    
 
 0.740
TRIM28
Tripartite motif containing 28.
    
  0.721
G1P5Y1_MYOLU
Mitogen-activated protein kinase.
    
 0.693
G1QER2_MYOLU
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.693
TRIM33
Tripartite motif containing 33.
    
  0.660
KDM6A
Lysine demethylase 6A.
    
 0.639
G1PZQ6_MYOLU
Uncharacterized protein.
    
  0.627
TCF15
Transcription factor 15.
   
 
 0.623
TRIM24
Tripartite motif containing 24.
    
  0.614
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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