STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRMOtRNA methyltransferase O. (440 aa)    
Predicted Functional Partners:
DTYMK
Deoxythymidylate kinase.
    
  0.761
TYMS
Thymidylate synthetase.
    
  0.741
TPI1
Triosephosphate isomerase.
    
  0.737
SLAIN2
SLAIN motif family member 2.
      
 0.708
EXOC7
Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
      
 0.676
CDKAL1
CDK5 regulatory subunit associated protein 1 like 1.
  
  
 0.662
TRMT12
tRNA methyltransferase 12 homolog.
   
  
 0.641
MINDY2
MINDY lysine 48 deubiquitinase 2.
      
 0.618
TSEN15
tRNA splicing endonuclease subunit 15.
      
 0.613
GOLGA7
Golgin A7.
      
 0.612
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.