STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRMOtRNA methyltransferase O. (440 aa)    
Predicted Functional Partners:
HSBP1
Heat shock factor binding protein 1.
    
   0.868
RAB14
RAB14, member RAS oncogene family.
   
   0.750
RHPN2
Rhophilin Rho GTPase binding protein 2.
    
   0.730
TNKS2
Poly [ADP-ribose] polymerase.
    
   0.705
TNKS
Poly [ADP-ribose] polymerase.
    
   0.705
TIMM21
Translocase of inner mitochondrial membrane 21.
      
 0.683
VPS37C
VPS37C subunit of ESCRT-I.
      
 0.683
COX18
Cytochrome c oxidase assembly factor COX18.
      
 0.683
SEC22A
SEC22 homolog A, vesicle trafficking protein; Belongs to the synaptobrevin family.
      
 0.682
UBE2W
UBIQUITIN_CONJUGAT_2 domain-containing protein.
      
 0.682
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.