Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDE1CPhosphodiesterase. (670 aa)    
Predicted Functional Partners:
PDE1B
Phosphodiesterase.
  
 
0.993
PDE1A
Phosphodiesterase.
  
 
 
0.990
CALML5
Calmodulin like 5.
    
 0.976
CALM3
Calmodulin 3; Belongs to the calmodulin family.
    
 0.965
LOC102419493
Uncharacterized protein; Belongs to the calmodulin family.
    
 0.965
CALM2
Calmodulin 2; Belongs to the calmodulin family.
    
 0.965
LOC102440407
Uncharacterized protein; Belongs to the calmodulin family.
    
 0.965
CALML4
Calmodulin like 4.
    
 0.953
ENTPD1
Ectonucleoside triphosphate diphosphohydrolase 1; Belongs to the GDA1/CD39 NTPase family.
     
 0.936
ENTPD3
Ectonucleoside triphosphate diphosphohydrolase 3; Belongs to the GDA1/CD39 NTPase family.
     
 0.928
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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