STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGPEP1Pyroglutamyl-peptidase I. (209 aa)    
Predicted Functional Partners:
TGDS
TDP-glucose 4,6-dehydratase.
      
 0.726
LRRC25
Leucine rich repeat containing 25.
      
 0.709
DDX31
DEAD-box helicase 31; Belongs to the DEAD box helicase family.
  
  
 0.706
G1Q813_MYOLU
Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.
 
   
  0.695
G1QCP5_MYOLU
Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.
 
   
  0.695
DDX10
DEAD-box helicase 10; Belongs to the DEAD box helicase family.
     
 0.642
LMBRD2
LMBR1 domain containing 2.
      
 0.574
HIVEP3
Human immunodeficiency virus type I enhancer binding protein 3.
      
 0.573
ATP23
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.
      
 0.568
G1NV78_MYOLU
RNA helicase.
     
 0.557
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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