PIWIL2 protein (Myotis lucifugus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PIWIL2

Piwi like RNA-mediated gene silencing 2; Belongs to the argonaute family. (969 aa)

Predicted Functional Partners:

TDRD15

0.979

TDRD6

0.979

TDRD9

0.921

TDRD5

0.907

RNF17

0.899

DDX4

0.890

TDRD7

0.888

TDRKH

0.886

MOV10L1

0.854

MOV10

0.854

Your Current Organism:

Myotis lucifugus

NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX4	MOV10	ENSMLUP00000001091	ENSMLUP00000008957	DEAD-box helicase 4; Belongs to the DEAD box helicase family.	Mov10 RISC complex RNA helicase.	0.786
DDX4	MOV10L1	ENSMLUP00000001091	ENSMLUP00000006201	DEAD-box helicase 4; Belongs to the DEAD box helicase family.	Mov10 like RISC complex RNA helicase 1.	0.786
DDX4	PIWIL2	ENSMLUP00000001091	ENSMLUP00000001927	DEAD-box helicase 4; Belongs to the DEAD box helicase family.	Piwi like RNA-mediated gene silencing 2; Belongs to the argonaute family.	0.890
DDX4	RNF17	ENSMLUP00000001091	ENSMLUP00000003562	DEAD-box helicase 4; Belongs to the DEAD box helicase family.	Ring finger protein 17.	0.607
DDX4	TDRD15	ENSMLUP00000001091	ENSMLUP00000007207	DEAD-box helicase 4; Belongs to the DEAD box helicase family.	Tudor domain containing 15.	0.791
DDX4	TDRD5	ENSMLUP00000001091	ENSMLUP00000009467	DEAD-box helicase 4; Belongs to the DEAD box helicase family.	Tudor domain containing 5.	0.705
DDX4	TDRD6	ENSMLUP00000001091	ENSMLUP00000013959	DEAD-box helicase 4; Belongs to the DEAD box helicase family.	Tudor domain containing 6.	0.791
DDX4	TDRD7	ENSMLUP00000001091	ENSMLUP00000015427	DEAD-box helicase 4; Belongs to the DEAD box helicase family.	Tudor domain containing 7.	0.532
DDX4	TDRD9	ENSMLUP00000001091	ENSMLUP00000010934	DEAD-box helicase 4; Belongs to the DEAD box helicase family.	Tudor domain containing 9.	0.703
DDX4	TDRKH	ENSMLUP00000001091	ENSMLUP00000002025	DEAD-box helicase 4; Belongs to the DEAD box helicase family.	Tudor and KH domain containing.	0.486
MOV10	DDX4	ENSMLUP00000008957	ENSMLUP00000001091	Mov10 RISC complex RNA helicase.	DEAD-box helicase 4; Belongs to the DEAD box helicase family.	0.786
MOV10	PIWIL2	ENSMLUP00000008957	ENSMLUP00000001927	Mov10 RISC complex RNA helicase.	Piwi like RNA-mediated gene silencing 2; Belongs to the argonaute family.	0.854
MOV10	RNF17	ENSMLUP00000008957	ENSMLUP00000003562	Mov10 RISC complex RNA helicase.	Ring finger protein 17.	0.599
MOV10	TDRD15	ENSMLUP00000008957	ENSMLUP00000007207	Mov10 RISC complex RNA helicase.	Tudor domain containing 15.	0.820
MOV10	TDRD5	ENSMLUP00000008957	ENSMLUP00000009467	Mov10 RISC complex RNA helicase.	Tudor domain containing 5.	0.849
MOV10	TDRD6	ENSMLUP00000008957	ENSMLUP00000013959	Mov10 RISC complex RNA helicase.	Tudor domain containing 6.	0.820
MOV10	TDRD7	ENSMLUP00000008957	ENSMLUP00000015427	Mov10 RISC complex RNA helicase.	Tudor domain containing 7.	0.684
MOV10	TDRD9	ENSMLUP00000008957	ENSMLUP00000010934	Mov10 RISC complex RNA helicase.	Tudor domain containing 9.	0.542
MOV10	TDRKH	ENSMLUP00000008957	ENSMLUP00000002025	Mov10 RISC complex RNA helicase.	Tudor and KH domain containing.	0.710
MOV10L1	DDX4	ENSMLUP00000006201	ENSMLUP00000001091	Mov10 like RISC complex RNA helicase 1.	DEAD-box helicase 4; Belongs to the DEAD box helicase family.	0.786