STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBI1ORC ubiquitin ligase 1. (716 aa)    
Predicted Functional Partners:
CNOT11
CCR4-NOT transcription complex subunit 11.
    
 
 0.788
ORC3
Origin recognition complex subunit 3.
   
 
 0.788
ORC5
Origin recognition complex subunit 5.
    
 
 0.759
ZNF184
Zinc finger protein 184.
      
 0.710
TNKS1BP1
Tankyrase 1 binding protein 1.
    
 
 0.624
CNOT10
CCR4-NOT transcription complex subunit 10.
    
 
 0.624
RANGAP1
Ran GTPase activating protein 1.
      
 0.572
TOB2
Transducer of ERBB2, 2.
    
 
 0.569
RBFOX2
RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.
      
 0.534
CNOT1
CCR4-NOT transcription complex subunit 1.
    
   0.499
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.