Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GTF3AGeneral transcription factor IIIA. (331 aa)    
Predicted Functional Partners:
GTF3C1
General transcription factor IIIC subunit 1.
    
 0.922
GTF3C3
General transcription factor IIIC subunit 3.
    
 0.911
BRF1
BRF1 RNA polymerase III transcription initiation factor subunit.
   
 0.909
BDP1
B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.
    
 0.899
GTF3C5
General transcription factor IIIC subunit 5.
    
 0.800
POLR2L
RNA polymerase II subunit L.
    
 0.797
GTF3C4
General transcription factor IIIC subunit 4.
    
 0.776
TBP
TATA-box binding protein.
   
 0.764
TBPL2
TATA-box binding protein like 2.
   
 0.764
GTF3C2
General transcription factor IIIC subunit 2.
    
 0.760
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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