Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RBM28RNA binding motif protein 28. (762 aa)    
Predicted Functional Partners:
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.996
DDX27
DEAD-box helicase 27; Belongs to the DEAD box helicase family.
   
 
 0.994
CEBPZ
CCAAT enhancer binding protein zeta.
   
 
 0.994
RBM34
RNA binding motif protein 34.
   
 
 0.994
PDCD11
Programmed cell death 11.
   
 0.993
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 
 0.993
NIP7
60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
   
 
 0.993
DDX24
DEAD-box helicase 24.
   
 
 0.992
GTPBP4
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.992
RPF2
Ribosome production factor 2 homolog.
   
 
 0.991
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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