Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BRICD5 | CIB3 | ENSMLUP00000022555 | ENSMLUP00000014753 | BRICHOS domain containing 5. | Calcium and integrin binding family member 3. | 0.795 |
BRICD5 | LOC102424924 | ENSMLUP00000022555 | ENSMLUP00000013616 | BRICHOS domain containing 5. | Uncharacterized protein. | 0.788 |
BRICD5 | OTOG | ENSMLUP00000022555 | ENSMLUP00000002324 | BRICHOS domain containing 5. | Otogelin. | 0.491 |
BRICD5 | ZPLD1 | ENSMLUP00000022555 | ENSMLUP00000002080 | BRICHOS domain containing 5. | Zona pellucida like domain containing 1. | 0.849 |
CIB3 | BRICD5 | ENSMLUP00000014753 | ENSMLUP00000022555 | Calcium and integrin binding family member 3. | BRICHOS domain containing 5. | 0.795 |
CIB3 | DYNLRB1 | ENSMLUP00000014753 | ENSMLUP00000004389 | Calcium and integrin binding family member 3. | Dynein light chain roadblock; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. | 0.404 |
CIB3 | DYNLRB2 | ENSMLUP00000014753 | ENSMLUP00000001282 | Calcium and integrin binding family member 3. | Dynein light chain roadblock; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. | 0.404 |
CIB3 | LOC102424924 | ENSMLUP00000014753 | ENSMLUP00000013616 | Calcium and integrin binding family member 3. | Uncharacterized protein. | 0.769 |
CIB3 | OTOG | ENSMLUP00000014753 | ENSMLUP00000002324 | Calcium and integrin binding family member 3. | Otogelin. | 0.449 |
CIB3 | ZPLD1 | ENSMLUP00000014753 | ENSMLUP00000002080 | Calcium and integrin binding family member 3. | Zona pellucida like domain containing 1. | 0.769 |
DYNLRB1 | CIB3 | ENSMLUP00000004389 | ENSMLUP00000014753 | Dynein light chain roadblock; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. | Calcium and integrin binding family member 3. | 0.404 |
DYNLRB1 | ZPLD1 | ENSMLUP00000004389 | ENSMLUP00000002080 | Dynein light chain roadblock; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. | Zona pellucida like domain containing 1. | 0.824 |
DYNLRB2 | CIB3 | ENSMLUP00000001282 | ENSMLUP00000014753 | Dynein light chain roadblock; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. | Calcium and integrin binding family member 3. | 0.404 |
DYNLRB2 | ZPLD1 | ENSMLUP00000001282 | ENSMLUP00000002080 | Dynein light chain roadblock; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. | Zona pellucida like domain containing 1. | 0.824 |
FAM136A | ZPLD1 | ENSMLUP00000002247 | ENSMLUP00000002080 | Uncharacterized protein. | Zona pellucida like domain containing 1. | 0.666 |
LOC102424924 | BRICD5 | ENSMLUP00000013616 | ENSMLUP00000022555 | Uncharacterized protein. | BRICHOS domain containing 5. | 0.788 |
LOC102424924 | CIB3 | ENSMLUP00000013616 | ENSMLUP00000014753 | Uncharacterized protein. | Calcium and integrin binding family member 3. | 0.769 |
LOC102424924 | ZPLD1 | ENSMLUP00000013616 | ENSMLUP00000002080 | Uncharacterized protein. | Zona pellucida like domain containing 1. | 0.769 |
OTOG | BRICD5 | ENSMLUP00000002324 | ENSMLUP00000022555 | Otogelin. | BRICHOS domain containing 5. | 0.491 |
OTOG | CIB3 | ENSMLUP00000002324 | ENSMLUP00000014753 | Otogelin. | Calcium and integrin binding family member 3. | 0.449 |
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