STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C6orf89Chromosome 6 open reading frame 89. (348 aa)    
Predicted Functional Partners:
PI16
Peptidase inhibitor 16; Belongs to the CRISP family.
 
    
 0.645
ABCD4
ATP binding cassette subfamily D member 4.
      
 0.594
SCUBE3
Signal peptide, CUB domain and EGF like domain containing 3.
      
 0.569
VRK1
VRK serine/threonine kinase 1; Belongs to the protein kinase superfamily.
      
 0.477
RSL24D1
Ribosomal L24 domain containing 1.
      
 0.475
NBR1
NBR1 autophagy cargo receptor.
   
  
 0.456
ILRUN
Inflammation and lipid regulator with UBA-like and NBR1-like domains.
   
  
 0.415
PTRHD1
Peptidyl-tRNA hydrolase domain containing 1.
    
   0.408
ADCY3
Adenylate cyclase type 3; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.
    
   0.408
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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