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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTX1Orthodenticle homeobox 1. (314 aa)    
Predicted Functional Partners:
TBR1
T-box brain transcription factor 1.
   
 
 0.690
FOXG1
Uncharacterized protein.
   
  
 0.619
RHO
Rhodopsin.
   
  
 0.590
TGM7
Transglutaminase 7.
      
 0.573
SATB2
DNA-binding protein SATB.
      
 0.571
LRRCC1
Leucine rich repeat and coiled-coil centrosomal protein 1.
      
 0.570
HAND1
Heart and neural crest derivatives expressed 1.
      
 0.570
LHFPL5
LHFPL tetraspan subfamily member 5.
      
 0.569
G1PN54_MYOLU
Uncharacterized protein.
    
 
 0.556
G1PRN0_MYOLU
Homeobox domain-containing protein.
      
 0.556
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.