RPS6KC1 protein (Myotis lucifugus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RPS6KC1

Ribosomal protein S6 kinase C1. (1059 aa)

Predicted Functional Partners:

RINT1

0.990

USE1

0.987

STX18

0.985

ZW10

0.985

NBAS

0.959

LYPD6B

0.896

KATNAL2

0.840

MAPK7

0.835

SEC22A

0.800

SEC22C

0.800

Your Current Organism:

Myotis lucifugus

NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KATNAL2	LYPD6B	ENSMLUP00000003717	ENSMLUP00000007586	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	LY6/PLAUR domain containing 6B.	0.807
KATNAL2	MAPK7	ENSMLUP00000003717	ENSMLUP00000007347	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.678
KATNAL2	NBAS	ENSMLUP00000003717	ENSMLUP00000002745	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	Neuroblastoma amplified sequence.	0.539
KATNAL2	RINT1	ENSMLUP00000003717	ENSMLUP00000004512	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	RAD50 interactor 1.	0.594
KATNAL2	RPS6KC1	ENSMLUP00000003717	ENSMLUP00000002191	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	Ribosomal protein S6 kinase C1.	0.840
KATNAL2	SEC22A	ENSMLUP00000003717	ENSMLUP00000007494	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	SEC22 homolog A, vesicle trafficking protein; Belongs to the synaptobrevin family.	0.656
KATNAL2	SEC22C	ENSMLUP00000003717	ENSMLUP00000011844	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	Longin domain-containing protein; Belongs to the synaptobrevin family.	0.656
KATNAL2	STX18	ENSMLUP00000003717	ENSMLUP00000009558	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	Syntaxin 18.	0.713
KATNAL2	USE1	ENSMLUP00000003717	ENSMLUP00000013075	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	Unconventional SNARE in the ER 1.	0.614
KATNAL2	ZW10	ENSMLUP00000003717	ENSMLUP00000012922	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	Zw10 kinetochore protein.	0.607
LYPD6B	KATNAL2	ENSMLUP00000007586	ENSMLUP00000003717	LY6/PLAUR domain containing 6B.	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	0.807
LYPD6B	RPS6KC1	ENSMLUP00000007586	ENSMLUP00000002191	LY6/PLAUR domain containing 6B.	Ribosomal protein S6 kinase C1.	0.896
MAPK7	KATNAL2	ENSMLUP00000007347	ENSMLUP00000003717	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	0.678
MAPK7	RPS6KC1	ENSMLUP00000007347	ENSMLUP00000002191	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Ribosomal protein S6 kinase C1.	0.835
NBAS	KATNAL2	ENSMLUP00000002745	ENSMLUP00000003717	Neuroblastoma amplified sequence.	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	0.539
NBAS	RINT1	ENSMLUP00000002745	ENSMLUP00000004512	Neuroblastoma amplified sequence.	RAD50 interactor 1.	0.999
NBAS	RPS6KC1	ENSMLUP00000002745	ENSMLUP00000002191	Neuroblastoma amplified sequence.	Ribosomal protein S6 kinase C1.	0.959
NBAS	SEC22A	ENSMLUP00000002745	ENSMLUP00000007494	Neuroblastoma amplified sequence.	SEC22 homolog A, vesicle trafficking protein; Belongs to the synaptobrevin family.	0.840
NBAS	SEC22C	ENSMLUP00000002745	ENSMLUP00000011844	Neuroblastoma amplified sequence.	Longin domain-containing protein; Belongs to the synaptobrevin family.	0.840
NBAS	STX18	ENSMLUP00000002745	ENSMLUP00000009558	Neuroblastoma amplified sequence.	Syntaxin 18.	0.994