FAM155A protein (Myotis lucifugus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

FAM155A

Family with sequence similarity 155 member A. (315 aa)

Predicted Functional Partners:

UNC79

0.999

FAM155A-2

0.900

G1PTV3_MYOLU

0.877

G1Q3Q1_MYOLU

0.877

UNC80

0.830

TAFA2

0.612

TOMM70

0.570

G1PGI2_MYOLU

0.570

WSB1

0.561

BCO2

0.559

Your Current Organism:

Myotis lucifugus

NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BCO2	FAM155A	ENSMLUP00000016139	ENSMLUP00000002216	Beta-carotene oxygenase 2.	Family with sequence similarity 155 member A.	0.559
BCO2	FAM155A-2	ENSMLUP00000016139	ENSMLUP00000022123	Beta-carotene oxygenase 2.	Uncharacterized protein.	0.559
BCO2	G1PGI2_MYOLU	ENSMLUP00000016139	ENSMLUP00000009747	Beta-carotene oxygenase 2.	Uncharacterized protein.	0.673
BCO2	TAFA2	ENSMLUP00000016139	ENSMLUP00000004387	Beta-carotene oxygenase 2.	TAFA chemokine like family member 2.	0.571
BCO2	TOMM70	ENSMLUP00000016139	ENSMLUP00000003957	Beta-carotene oxygenase 2.	Translocase of outer mitochondrial membrane 70.	0.572
FAM155A	BCO2	ENSMLUP00000002216	ENSMLUP00000016139	Family with sequence similarity 155 member A.	Beta-carotene oxygenase 2.	0.559
FAM155A	FAM155A-2	ENSMLUP00000002216	ENSMLUP00000022123	Family with sequence similarity 155 member A.	Uncharacterized protein.	0.900
FAM155A	G1PGI2_MYOLU	ENSMLUP00000002216	ENSMLUP00000009747	Family with sequence similarity 155 member A.	Uncharacterized protein.	0.570
FAM155A	G1PTV3_MYOLU	ENSMLUP00000002216	ENSMLUP00000014678	Family with sequence similarity 155 member A.	Uncharacterized protein.	0.877
FAM155A	G1Q3Q1_MYOLU	ENSMLUP00000002216	ENSMLUP00000018334	Family with sequence similarity 155 member A.	Uncharacterized protein.	0.877
FAM155A	TAFA2	ENSMLUP00000002216	ENSMLUP00000004387	Family with sequence similarity 155 member A.	TAFA chemokine like family member 2.	0.612
FAM155A	TOMM70	ENSMLUP00000002216	ENSMLUP00000003957	Family with sequence similarity 155 member A.	Translocase of outer mitochondrial membrane 70.	0.570
FAM155A	UNC79	ENSMLUP00000002216	ENSMLUP00000014053	Family with sequence similarity 155 member A.	Unc-79 homolog, NALCN channel complex subunit.	0.999
FAM155A	UNC80	ENSMLUP00000002216	ENSMLUP00000013131	Family with sequence similarity 155 member A.	Unc-80 homolog, NALCN channel complex subunit.	0.830
FAM155A	WSB1	ENSMLUP00000002216	ENSMLUP00000001636	Family with sequence similarity 155 member A.	WD repeat and SOCS box containing 1.	0.561
FAM155A-2	BCO2	ENSMLUP00000022123	ENSMLUP00000016139	Uncharacterized protein.	Beta-carotene oxygenase 2.	0.559
FAM155A-2	FAM155A	ENSMLUP00000022123	ENSMLUP00000002216	Uncharacterized protein.	Family with sequence similarity 155 member A.	0.900
FAM155A-2	G1PGI2_MYOLU	ENSMLUP00000022123	ENSMLUP00000009747	Uncharacterized protein.	Uncharacterized protein.	0.570
FAM155A-2	G1PTV3_MYOLU	ENSMLUP00000022123	ENSMLUP00000014678	Uncharacterized protein.	Uncharacterized protein.	0.877
FAM155A-2	G1Q3Q1_MYOLU	ENSMLUP00000022123	ENSMLUP00000018334	Uncharacterized protein.	Uncharacterized protein.	0.877