STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NONONon-POU domain containing octamer binding. (526 aa)    
Predicted Functional Partners:
SFPQ
Splicing factor proline and glutamine rich.
  
   
0.867
RBM14
Uncharacterized protein.
   
 
 0.784
G1Q7N1_MYOLU
Uncharacterized protein.
   
 
 0.784
MATR3
Uncharacterized protein.
   
 
 0.782
G1P397_MYOLU
Uncharacterized protein.
   
 
 0.776
G1Q5V7_MYOLU
RRM domain-containing protein.
   
 
 0.776
NUDT21
Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]
   
 
 0.773
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.765
G1Q217_MYOLU
Uncharacterized protein.
   
 
 0.765
PSPC1
Paraspeckle component 1.
      
0.759
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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