STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD28Ankyrin repeat domain 28. (1088 aa)    
Predicted Functional Partners:
PPP6R3
Protein phosphatase 6 regulatory subunit 3.
    
 0.989
PPP6C
Serine/threonine-protein phosphatase.
   
 0.989
PPP6R2
Protein phosphatase 6 regulatory subunit 2.
    
 0.909
BRCA1
Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...]
    
 0.692
IFT81
Intraflagellar transport 81.
    
 0.691
LRCH3
Leucine rich repeats and calponin homology domain containing 3.
    
 
 0.682
LOC102423130
Ubiquitin-like domain-containing protein.
    
  0.669
COPS5
COP9 signalosome subunit 5.
    
 0.663
CUL5
Cullin 5; Belongs to the cullin family.
    
  0.661
IFT22
Intraflagellar transport 22.
    
 0.659
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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