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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRAMD2BGRAM domain containing 2B. (437 aa)    
Predicted Functional Partners:
JAML
Uncharacterized protein.
    
 
 0.785
PDXDC1
Pyridoxal dependent decarboxylase domain containing 1.
      
 0.677
SCN5A
Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.
    
 0.638
GRAMD1B
GRAM domain containing 1B.
  
 
  
0.636
G1Q6R0_MYOLU
GRAM domain-containing protein.
  
 
 
0.623
G1Q8F7_MYOLU
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
    
   0.617
CYBRD1
Cytochrome b reductase 1.
      
 0.614
CLCA2
Chloride channel accessory 2.
    
 
 0.609
LOC102426489
VASt domain-containing protein.
    
 
 0.602
WDR81
WD_REPEATS_REGION domain-containing protein.
      
 0.594
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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