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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDK7Cyclin dependent kinase 7; Belongs to the protein kinase superfamily. (346 aa)    
Predicted Functional Partners:
MNAT1
MNAT1 component of CDK activating kinase.
   
 0.999
CCNH
Cyclin H; Belongs to the cyclin family.
    
 0.999
GTF2B
General transcription factor IIB.
   
 0.995
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
    
 0.994
ERCC2
ERCC excision repair 2, TFIIH core complex helicase subunit.
    
 0.994
GTF2H1
General transcription factor IIH subunit 1.
   
 0.994
GTF2H5
General transcription factor IIH subunit 5.
    
 0.992
TBP
TATA-box binding protein.
   
 0.992
GTF2H4
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.992
G1PAJ5_MYOLU
General transcription factor IIH subunit.
   
 0.988
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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