STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CASKCalcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. (803 aa)    
Predicted Functional Partners:
LIN7A
Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.
    
 0.998
APBA1
Amyloid beta precursor protein binding family A member 1.
   
 0.998
APBA3
Amyloid beta precursor protein binding family A member 3.
   
0.998
APBA2
Amyloid beta precursor protein binding family A member 2.
   
 0.998
LIN7C
Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.
    
 0.998
LIN7B
Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.
    
 0.998
WHRN
Whirlin.
    
 0.970
STXBP3
Syntaxin binding protein 3; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.970
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 0.967
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
0.964
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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