STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC1Tetratricopeptide repeat domain 1. (293 aa)    
Predicted Functional Partners:
G1P554_MYOLU
LRRcap domain-containing protein.
   
    0.787
VAPA
VAMP associated protein A.
    
 
 0.643
RBM12
RNA binding motif protein 12.
      
 0.622
RNF41
Ring finger protein 41.
    
   0.616
G1Q8D6_MYOLU
RING-type domain-containing protein.
    
   0.616
HSPA4
Heat shock protein family A (Hsp70) member 4.
    
 
 0.586
VPS13D
Vacuolar protein sorting 13 homolog D.
      
 0.570
SUGT1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
   
    0.567
RTN4IP1
Reticulon 4 interacting protein 1.
    
 
 0.535
VAPB
VAMP associated protein B and C.
    
 
 0.535
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.