STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX47DEAD-box helicase 47; Belongs to the DEAD box helicase family. (455 aa)    
Predicted Functional Partners:
UTP3
UTP3 small subunit processome component.
   
 0.999
NGDN
Neuroguidin.
   
 0.998
ESF1
ESF1 nucleolar pre-rRNA processing protein homolog.
   
 
 0.997
WDR46
WD repeat domain 46.
   
 0.996
PDCD11
Programmed cell death 11.
  
 0.995
NOP14
NOP14 nucleolar protein.
   
 0.993
DDX52
Uncharacterized protein.
  
0.992
LOC102422681
Uncharacterized protein.
  
0.992
LOC102430380
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.991
LOC102418019
KH_8 domain-containing protein.
   
 0.991
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.