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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP34Ubiquitin specific peptidase 34; Belongs to the peptidase C19 family. (3527 aa)    
Predicted Functional Partners:
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.974
ASH1L
ASH1 like histone lysine methyltransferase.
   
 
 0.949
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 
 0.918
BIRC6
Baculoviral IAP repeat containing 6.
   
 0.914
SMG1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.
   
   0.905
UBB
Uncharacterized protein.
   
 0.904
LOC102442670
Uncharacterized protein.
   
 0.904
ENSMLUP00000021652
annotation not available
   
 0.904
LOC102426990
ANK_REP_REGION domain-containing protein.
   
 
 0.901
ANKRD17
Ankyrin repeat domain 17.
   
 
 0.901
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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