GOLPH3L protein (Myotis lucifugus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

GOLPH3L

Golgi phosphoprotein 3 like. (285 aa)

Predicted Functional Partners:

SACM1L

0.960

COPA

0.750

THOC5

0.730

MYO18A

0.723

ARCN1

0.692

MAN2A1

0.678

POMT1

0.674

POMT2

0.674

LOC102420362

0.651

ATAD3A

0.639

Your Current Organism:

Myotis lucifugus

NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARCN1	COPA	ENSMLUP00000012843	ENSMLUP00000001215	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.	0.999
ARCN1	GOLPH3L	ENSMLUP00000012843	ENSMLUP00000003169	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	Golgi phosphoprotein 3 like.	0.692
ATAD3A	GOLPH3L	ENSMLUP00000008327	ENSMLUP00000003169	ATPase family AAA domain containing 3A.	Golgi phosphoprotein 3 like.	0.639
COPA	ARCN1	ENSMLUP00000001215	ENSMLUP00000012843	Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	0.999
COPA	GOLPH3L	ENSMLUP00000001215	ENSMLUP00000003169	Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.	Golgi phosphoprotein 3 like.	0.750
GOLPH3L	ARCN1	ENSMLUP00000003169	ENSMLUP00000012843	Golgi phosphoprotein 3 like.	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	0.692
GOLPH3L	ATAD3A	ENSMLUP00000003169	ENSMLUP00000008327	Golgi phosphoprotein 3 like.	ATPase family AAA domain containing 3A.	0.639
GOLPH3L	COPA	ENSMLUP00000003169	ENSMLUP00000001215	Golgi phosphoprotein 3 like.	Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.	0.750
GOLPH3L	LOC102420362	ENSMLUP00000003169	ENSMLUP00000009029	Golgi phosphoprotein 3 like.	Myb-like domain-containing protein.	0.651
GOLPH3L	MAN2A1	ENSMLUP00000003169	ENSMLUP00000011931	Golgi phosphoprotein 3 like.	Alpha-mannosidase.	0.678
GOLPH3L	MYO18A	ENSMLUP00000003169	ENSMLUP00000015187	Golgi phosphoprotein 3 like.	Myosin XVIIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.723
GOLPH3L	POMT1	ENSMLUP00000003169	ENSMLUP00000001151	Golgi phosphoprotein 3 like.	Protein O-mannosyltransferase 1.	0.674
GOLPH3L	POMT2	ENSMLUP00000003169	ENSMLUP00000004686	Golgi phosphoprotein 3 like.	Protein O-mannosyltransferase 2.	0.674
GOLPH3L	SACM1L	ENSMLUP00000003169	ENSMLUP00000014241	Golgi phosphoprotein 3 like.	SAC1 like phosphatidylinositide phosphatase.	0.960
GOLPH3L	THOC5	ENSMLUP00000003169	ENSMLUP00000011072	Golgi phosphoprotein 3 like.	THO complex 5.	0.730
LOC102420362	GOLPH3L	ENSMLUP00000009029	ENSMLUP00000003169	Myb-like domain-containing protein.	Golgi phosphoprotein 3 like.	0.651
MAN2A1	GOLPH3L	ENSMLUP00000011931	ENSMLUP00000003169	Alpha-mannosidase.	Golgi phosphoprotein 3 like.	0.678
MYO18A	GOLPH3L	ENSMLUP00000015187	ENSMLUP00000003169	Myosin XVIIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Golgi phosphoprotein 3 like.	0.723
POMT1	GOLPH3L	ENSMLUP00000001151	ENSMLUP00000003169	Protein O-mannosyltransferase 1.	Golgi phosphoprotein 3 like.	0.674
POMT1	POMT2	ENSMLUP00000001151	ENSMLUP00000004686	Protein O-mannosyltransferase 1.	Protein O-mannosyltransferase 2.	0.989