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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGAP6Rho GTPase activating protein 6. (779 aa)    
Predicted Functional Partners:
CDC42
Cell division cycle 42.
    
 0.849
ASPM
Abnormal spindle microtubule assembly.
   
   0.835
RAC1
Rac family small GTPase 1.
    
 0.788
TTK
TTK protein kinase.
   
    0.787
ZCWPW2
Zinc finger CW-type and PWWP domain containing 2.
   
  
 0.749
KIF11
Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.749
RACGAP1
Rac GTPase activating protein 1.
   
 
 
0.748
ARHGAP15
Rho GTPase activating protein 15.
     
0.746
RHOQ
Ras homolog family member Q.
    
 0.745
RND1
Rho family GTPase 1.
    
 0.744
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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