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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC28ACoiled-coil domain containing 28A. (247 aa)    
Predicted Functional Partners:
ECT2L
Epithelial cell transforming 2 like.
 
    
 0.843
TMEM159
Transmembrane protein 159.
      
 0.612
NHSL1
NHS like 1.
      
 0.612
DUSP19
Dual specificity phosphatase 19; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
      
 0.598
UBFD1
Ubiquitin family domain containing 1.
      
 0.573
PRPSAP1
Phosphoribosyl pyrophosphate synthetase associated protein 1.
      
 0.573
AHDC1
AT-hook DNA binding motif containing 1.
      
 0.573
FPGT
Fucose-1-phosphate guanylyltransferase.
      
 0.572
SEC14L1
SEC14 like lipid binding 1.
      
 0.570
TIPRL
TOR signaling pathway regulator.
      
 0.570
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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