STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VMP1Vacuole membrane protein 1. (406 aa)    
Predicted Functional Partners:
BECN1
Beclin 1.
    
 0.971
ATG13
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
     
 0.935
G1PZN5_MYOLU
Uncharacterized protein.
    
 0.905
LOC102422056
Uncharacterized protein.
    
 0.905
LOC102417876
Uncharacterized protein.
    
 0.905
TP53INP2
Tumor protein p53 inducible nuclear protein 2.
     
 0.882
TP53INP1
Tumor protein p53 inducible nuclear protein 1.
     
 0.796
ATG2A
Autophagy related 2A.
      
 0.769
TMEM41B
Transmembrane protein 41B.
    
 
 0.735
TMEM41A
Transmembrane protein 41A.
    
 
 0.713
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.