STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN1Tetraspanin. (239 aa)    
Predicted Functional Partners:
G1PJ64_MYOLU
Uncharacterized protein.
   
 0.736
CDHR2
Cadherin related family member 2.
     
 0.685
MST1R
Macrophage stimulating 1 receptor.
   
 0.665
MET
MET proto-oncogene, receptor tyrosine kinase.
   
 0.648
TSPAN13
Tetraspanin 13; Belongs to the tetraspanin (TM4SF) family.
   
  
 0.629
PDGFB
Platelet derived growth factor subunit B; Belongs to the PDGF/VEGF growth factor family.
   
 0.622
TSC22D2
TSC22 domain family member 2.
      
 0.618
RBM26
RNA binding motif protein 26.
      
 0.613
CACNG1
Voltage-dependent calcium channel gamma-1 subunit; Regulatory subunit of the voltage-gated calcium channel that gives rise to L-type calcium currents in skeletal muscle. Regulates channel inactivation kinetics.
      
 0.612
G1PQZ2_MYOLU
PL48 domain-containing protein.
      
 0.573
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.