STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FTOFTO alpha-ketoglutarate dependent dioxygenase. (411 aa)    
Predicted Functional Partners:
ALKBH5
AlkB homolog 5, RNA demethylase.
     
 0.988
ALKBH8
AlkB homolog 8, tRNA methyltransferase.
     
 0.907
CREB1
cAMP responsive element binding protein 1.
      
 0.854
ALKBH1
AlkB homolog 1, histone H2A dioxygenase.
     
 0.793
WTAP
WT1 associated protein.
      
 0.769
YTHDF1
YTH N6-methyladenosine RNA binding protein 1.
      
 0.769
METTL14
Methyltransferase like 14; Belongs to the MT-A70-like family.
      
 0.769
YTHDF3
YTH N6-methyladenosine RNA binding protein 3.
      
 0.769
G1P9Y9_MYOLU
Fork-head domain-containing protein.
      
 0.769
YTHDF2
YTH N6-methyladenosine RNA binding protein 2.
      
 0.769
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.