STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF220Ring finger protein 220. (353 aa)    
Predicted Functional Partners:
ERI3
ERI1 exoribonuclease family member 3.
      
 0.769
G1PBB6_MYOLU
Uncharacterized protein.
    
  0.763
ZC4H2
Zinc finger C4H2-type containing.
    
 
 0.713
TMEM53
Transmembrane protein 53.
      
 0.703
LRIG3
Leucine rich repeats and immunoglobulin like domains 3.
    
 
 0.692
ASB13
Ankyrin repeat and SOCS box containing 13.
    
 
 0.678
SH3RF1
SH3 domain containing ring finger 1.
    
 
 0.659
HECTD3
HECT domain E3 ubiquitin protein ligase 3.
    
 
 0.638
G1PZQ6_MYOLU
Uncharacterized protein.
    
  0.627
G1P6Y5_MYOLU
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.619
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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