STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM53Transmembrane protein 53. (278 aa)    
Predicted Functional Partners:
ACBD6
Acyl-CoA binding domain containing 6.
      
 0.769
ASPHD2
Aspartate beta-hydroxylase domain containing 2.
      
 0.769
TMEM223
Transmembrane protein 223.
      
 0.769
B3GLCT
Beta 3-glucosyltransferase.
      
 0.769
TMEM147
Transmembrane protein 147.
      
 0.769
RNF220
Ring finger protein 220.
      
 0.703
TMEM38A
Transmembrane protein 38A.
   
  
 0.684
DNAJC3
DnaJ heat shock protein family (Hsp40) member C3.
      
 0.677
NTPCR
Nucleoside-triphosphatase, cancer-related.
   
  
 0.659
WDTC1
WD and tetratricopeptide repeats 1.
   
  
 0.572
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.