STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP2Matrix metallopeptidase 2. (661 aa)    
Predicted Functional Partners:
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.968
MMP7
Matrix metallopeptidase 7.
   
0.964
SCUBE3
Signal peptide, CUB domain and EGF like domain containing 3.
   
 0.958
TIMP2
TIMP metallopeptidase inhibitor 2.
   
 0.925
THBS1
Thrombospondin 1.
   
 0.909
VEGFA
PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.
     
 0.905
MMP14
Matrix metallopeptidase 14.
  
0.900
SRC
Tyrosine-protein kinase.
    
 0.897
MMP9
Matrix metallopeptidase 9.
  
0.880
TIMP1
TIMP metallopeptidase inhibitor 1.
   
 0.872
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.