STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102435064OTU domain-containing protein. (303 aa)    
Predicted Functional Partners:
OTUB2
OTU deubiquitinase, ubiquitin aldehyde binding 2.
    
 
 0.698
VCPIP1
Valosin containing protein interacting protein 1.
      
 0.641
TRIP12
Thyroid hormone receptor interactor 12.
      
 0.573
OTUD3
OTU deubiquitinase 3.
   
  
0.573
OTUD5
OTU deubiquitinase 5.
      
 0.571
OTUB1
Ubiquitin thioesterase.
    
 
 0.568
G1Q576_MYOLU
OTU domain-containing protein.
    
 
 0.568
USP35
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
      
 0.563
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 
 0.534
PSMD7
Proteasome 26S subunit, non-ATPase 7.
   
  
 0.494
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.